Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 AL023284.2-201ENST00000405850 579 ntBASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 AC133681.1-201ENST00000465482 601 ntBASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 AC011506.1-201ENST00000474329 610 ntBASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 KRT16P1-201ENST00000399124 1418 ntBASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
TRAV5A0A0B4J249 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 AL353708.3-201ENST00000610272 989 ntBASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 AL031985.4-201ENST00000642138 673 ntBASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 GPAT2P1-201ENST00000444924 1672 ntBASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV5A0A0B4J249 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 MCCD1P1-208ENST00000445732 328 ntBASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 RN7SL471P-201ENST00000580476 299 ntBASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms