Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 NUDT16P1-203ENST00000513809 620 ntBASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV6-7A0A0A0MS04 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 SDHAP2-201ENST00000455183 2001 ntBASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC097488.1-201ENST00000507834 756 ntBASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 AL163051.1-201ENST00000569214 1512 ntBASIC15.21■□□□□ 0.03
TRBV6-7A0A0A0MS04 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.21■□□□□ 0.02
TRBV6-7A0A0A0MS04 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-7A0A0A0MS04 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-7A0A0A0MS04 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC036111.1-201ENST00000533973 1582 ntBASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC006116.8-202ENST00000587620 1550 ntBASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 LINC00602-201ENST00000629776 2065 ntBASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 MIR149-201ENST00000384879 89 ntBASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC018695.7-201ENST00000624587 2492 ntBASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC009102.3-201ENST00000623118 1491 ntBASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC046158.3-201ENST00000624947 2558 ntBASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-7A0A0A0MS04 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms