Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 MIR564-202ENST00000385049 94 ntBASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGA3Q9Y5H0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 AC008556.1-201ENST00000610908 2040 ntBASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 TSPY19P-201ENST00000418461 509 ntBASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 AL845331.1-201ENST00000424978 1190 ntBASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 AC246785.2-201ENST00000432512 513 ntBASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 TSPY18P-201ENST00000441642 509 ntBASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 UNC93B7-201ENST00000509439 705 ntBASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 TPSP2-201ENST00000561760 610 ntBASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 RNF126P1-202ENST00000569893 925 ntBASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA3Q9Y5H0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 AC012313.1-201ENST00000593393 3059 ntBASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 PVRIG2P-201ENST00000435460 978 ntBASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA3Q9Y5H0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 KRT8P32-201ENST00000512863 1461 ntBASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA3Q9Y5H0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms