Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 AC132938.6-201ENST00000623828 1655 ntBASIC18.93■□□□□ 0.62
YIPF1Q9Y548 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 KRT18P67-201ENST00000432816 1264 ntBASIC18.93■□□□□ 0.62
YIPF1Q9Y548 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 RNA5SP419-201ENST00000515908 135 ntBASIC18.93■□□□□ 0.62
YIPF1Q9Y548 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 AP001269.4-201ENST00000609611 512 ntBASIC18.93■□□□□ 0.62
YIPF1Q9Y548 AL773604.1-201ENST00000617417 272 ntBASIC18.93■□□□□ 0.62
YIPF1Q9Y548 AL355877.3-201ENST00000622820 899 ntBASIC18.93■□□□□ 0.62
YIPF1Q9Y548 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.93■□□□□ 0.62
YIPF1Q9Y548 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 RBM17P3-201ENST00000417687 1192 ntBASIC18.92■□□□□ 0.62
YIPF1Q9Y548 FGFR3P6-201ENST00000457012 610 ntBASIC18.92■□□□□ 0.62
YIPF1Q9Y548 AP001005.1-201ENST00000571755 1248 ntBASIC18.92■□□□□ 0.62
YIPF1Q9Y548 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 AC120114.3-201ENST00000611923 658 ntBASIC18.92■□□□□ 0.62
YIPF1Q9Y548 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
YIPF1Q9Y548 CROCCP3-202ENST00000420820 1947 ntBASIC18.92■□□□□ 0.62
YIPF1Q9Y548 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 AF186996.4-201ENST00000467186 377 ntBASIC18.91■□□□□ 0.62
YIPF1Q9Y548 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 AC148477.8-201ENST00000624298 468 ntBASIC18.91■□□□□ 0.62
YIPF1Q9Y548 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YIPF1Q9Y548 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YIPF1Q9Y548 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 264.2 ms