Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 LINC00304-203ENST00000565008 1864 ntBASIC17.95■□□□□ 0.46
MKS1Q9NXB0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 CD177P1-201ENST00000606252 935 ntBASIC17.95■□□□□ 0.46
MKS1Q9NXB0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 AC012313.1-201ENST00000593393 3059 ntBASIC17.95■□□□□ 0.46
MKS1Q9NXB0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MKS1Q9NXB0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 AC022211.2-201ENST00000585075 2527 ntBASIC17.94■□□□□ 0.46
MKS1Q9NXB0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 AC097488.1-201ENST00000507834 756 ntBASIC17.94■□□□□ 0.46
MKS1Q9NXB0 NUDT16P1-203ENST00000513809 620 ntBASIC17.94■□□□□ 0.46
MKS1Q9NXB0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 AC104390.1-201ENST00000555663 520 ntBASIC17.94■□□□□ 0.46
MKS1Q9NXB0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MKS1Q9NXB0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 AC100803.2-201ENST00000562459 1963 ntBASIC17.93■□□□□ 0.46
MKS1Q9NXB0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 AL135905.2-201ENST00000584934 1404 ntBASIC17.93■□□□□ 0.46
MKS1Q9NXB0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MKS1Q9NXB0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms