Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 AC036111.1-201ENST00000533973 1582 ntBASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 EGLN1P1-201ENST00000531623 762 ntBASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTPS2Q9NRF8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 KRT8P50-201ENST00000562022 1438 ntBASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS2Q9NRF8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 AC134043.2-201ENST00000624206 2238 ntBASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 AC034236.2-201ENST00000606662 1610 ntBASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 AC128688.1-201ENST00000487626 519 ntBASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 KRT18P41-201ENST00000518924 1277 ntBASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.93■□□□□ 0.3
CTPS2Q9NRF8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms