Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 LINC00304-203ENST00000565008 1864 ntBASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 RPS2P55-201ENST00000397318 883 ntBASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 AC107956.1-201ENST00000494359 873 ntBASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 FAM197Y4-202ENST00000622692 608 ntBASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 AC092338.2-201ENST00000568827 1415 ntBASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC52A3Q9NQ40 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 NKILA-202ENST00000614771 2598 ntBASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC52A3Q9NQ40 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms