Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 CETN4P-201ENST00000432407 469 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 KIZ-AS1-202ENST00000443753 1161 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 USP9YP10-201ENST00000454868 628 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AL139824.2-201ENST00000458731 1095 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 USP9YP5-201ENST00000511770 630 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 SLC25A1P1-201ENST00000528351 927 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC074051.4-201ENST00000564888 892 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC074051.2-201ENST00000565115 352 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC107905.1-201ENST00000616204 426 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC017037.4-201ENST00000624526 826 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 AC112497.1-201ENST00000624824 639 ntBASIC26.92■■□□□ 1.9
SENP3Q9H4L4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 FAM221A-201ENST00000344962 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.92■■□□□ 1.9
SENP3Q9H4L4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 ING3-202ENST00000339121 1222 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 MIR940-201ENST00000401276 94 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 RN7SKP38-201ENST00000410782 309 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 PTCD2P2-201ENST00000415579 1095 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 AC111000.5-201ENST00000506559 1178 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 POLD2P1-201ENST00000511220 997 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 RNU2-45P-201ENST00000516068 187 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 MTND3P12-201ENST00000559068 328 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 AC064872.1-201ENST00000604823 1072 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 AP000350.5-201ENST00000609825 613 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 AL121772.3-201ENST00000610840 674 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 AC008121.2-201ENST00000614647 523 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 Z99129.2-201ENST00000619967 314 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 AC020923.1-201ENST00000624021 917 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 TP73-AS1-207ENST00000624167 988 ntBASIC26.91■■□□□ 1.9
SENP3Q9H4L4 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SENP3Q9H4L4 RPS20P22-202ENST00000488192 1318 ntBASIC26.9■■□□□ 1.9
SENP3Q9H4L4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 MIR662-201ENST00000384847 95 ntBASIC26.9■■□□□ 1.9
SENP3Q9H4L4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AC092647.3-201ENST00000443044 633 ntBASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 TPT1P8-201ENST00000510120 555 ntBASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AC106795.1-205ENST00000512851 1056 ntBASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AC068987.2-201ENST00000565518 896 ntBASIC26.9■■□□□ 1.9
SENP3Q9H4L4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SENP3Q9H4L4 AL157384.1-201ENST00000445995 2473 ntBASIC26.9■■□□□ 1.9
SENP3Q9H4L4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.89■■□□□ 1.9
SENP3Q9H4L4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SENP3Q9H4L4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC26.89■■□□□ 1.9
SENP3Q9H4L4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SENP3Q9H4L4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC26.89■■□□□ 1.9
SENP3Q9H4L4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC26.89■■□□□ 1.9
SENP3Q9H4L4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms