Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 AP001160.2-201ENST00000596071 487 ntBASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CRAMP1Q96RY5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 AC004832.2-201ENST00000426397 482 ntBASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 AC009947.1-201ENST00000444350 727 ntBASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 DNAJB3-201ENST00000446806 729 ntBASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 RNA5SP416-201ENST00000516838 111 ntBASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 AC073592.4-201ENST00000623827 446 ntBASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 PMPCAP1-201ENST00000508114 1576 ntBASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CRAMP1Q96RY5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.14■■□□□ 1.14
CRAMP1Q96RY5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 AC096633.1-201ENST00000422446 749 ntBASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 AL022326.1-202ENST00000641533 845 ntBASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
CRAMP1Q96RY5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 KRT18P27-201ENST00000427733 1299 ntBASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 PRYP5-201ENST00000451909 266 ntBASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 MIR3687-2-201ENST00000577708 61 ntBASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 MIR3687-1-201ENST00000614492 61 ntBASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.13■■□□□ 1.13
CRAMP1Q96RY5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CRAMP1Q96RY5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.12■■□□□ 1.13
CRAMP1Q96RY5 AC132938.6-201ENST00000623828 1655 ntBASIC22.12■■□□□ 1.13
CRAMP1Q96RY5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CRAMP1Q96RY5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CRAMP1Q96RY5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CRAMP1Q96RY5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CRAMP1Q96RY5 BX005266.1-201ENST00000473402 457 ntBASIC22.12■■□□□ 1.13
CRAMP1Q96RY5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms