Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 AC132938.6-201ENST00000623828 1655 ntBASIC15.12■□□□□ 0.01
GAFA1Q96PS6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 LINC00602-201ENST00000629776 2065 ntBASIC15.12■□□□□ 0.01
GAFA1Q96PS6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 FAM86EP-206ENST00000510506 987 ntBASIC15.11■□□□□ 0.01
GAFA1Q96PS6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 AC005332.3-201ENST00000589904 676 ntBASIC15.11■□□□□ 0.01
GAFA1Q96PS6 GPR32P1-201ENST00000601788 811 ntBASIC15.11■□□□□ 0.01
GAFA1Q96PS6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 AC005332.1-201ENST00000577698 1310 ntBASIC15.11■□□□□ 0.01
GAFA1Q96PS6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GAFA1Q96PS6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 ARMC10P1-201ENST00000313754 855 ntBASIC15.1■□□□□ 0.01
GAFA1Q96PS6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 AL390719.2-201ENST00000606993 987 ntBASIC15.1■□□□□ 0.01
GAFA1Q96PS6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.1■□□□□ 0.01
GAFA1Q96PS6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 RNF165-205ENST00000588679 2904 ntBASIC15.1■□□□□ 0.01
GAFA1Q96PS6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.1■□□□□ 0.01
GAFA1Q96PS6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms