Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 MIR661-201ENST00000384842 89 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 AC092474.2-201ENST00000424288 719 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 KRT19P2-202ENST00000557173 1012 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 AC012645.4-201ENST00000610691 1061 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 AC009102.3-201ENST00000623118 1491 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 AC010460.3-201ENST00000511359 1579 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 AC015922.1-201ENST00000421102 1152 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 AC190387.1-201ENST00000551683 408 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 AL390955.2-201ENST00000603032 514 ntBASIC19.7■□□□□ 0.74
ALPK3Q96L96 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ALPK3Q96L96 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALPK3Q96L96 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.69■□□□□ 0.74
ALPK3Q96L96 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALPK3Q96L96 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 KLF4P1-201ENST00000412782 1185 ntBASIC19.68■□□□□ 0.74
ALPK3Q96L96 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 KRT18P65-201ENST00000439811 1286 ntBASIC19.68■□□□□ 0.74
ALPK3Q96L96 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 AC005225.4-201ENST00000557330 545 ntBASIC19.68■□□□□ 0.74
ALPK3Q96L96 AC008687.5-201ENST00000593746 558 ntBASIC19.68■□□□□ 0.74
ALPK3Q96L96 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 SDHAP2-201ENST00000455183 2001 ntBASIC19.68■□□□□ 0.74
ALPK3Q96L96 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 FAM58CP-201ENST00000435741 640 ntBASIC19.68■□□□□ 0.74
ALPK3Q96L96 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 AC004449.1-201ENST00000564240 433 ntBASIC19.68■□□□□ 0.74
ALPK3Q96L96 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 AC092902.6-201ENST00000641783 218 ntBASIC19.68■□□□□ 0.74
ALPK3Q96L96 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALPK3Q96L96 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
ALPK3Q96L96 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALPK3Q96L96 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALPK3Q96L96 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALPK3Q96L96 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALPK3Q96L96 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 AC022145.2-201ENST00000598203 171 ntBASIC19.67■□□□□ 0.74
ALPK3Q96L96 AC008667.4-201ENST00000607370 168 ntBASIC19.67■□□□□ 0.74
ALPK3Q96L96 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 AD001527.2-201ENST00000622994 785 ntBASIC19.67■□□□□ 0.74
ALPK3Q96L96 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ALPK3Q96L96 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms