Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.29■□□□□ 0.52
SHDQ96IW2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.29■□□□□ 0.52
SHDQ96IW2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.29■□□□□ 0.52
SHDQ96IW2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.29■□□□□ 0.52
SHDQ96IW2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.29■□□□□ 0.52
SHDQ96IW2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SHDQ96IW2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHDQ96IW2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHDQ96IW2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHDQ96IW2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
SHDQ96IW2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHDQ96IW2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.28■□□□□ 0.52
SHDQ96IW2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.28■□□□□ 0.52
SHDQ96IW2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.28■□□□□ 0.52
SHDQ96IW2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.28■□□□□ 0.52
SHDQ96IW2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHDQ96IW2 METTL21AP1-201ENST00000438852 635 ntBASIC18.28■□□□□ 0.52
SHDQ96IW2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.28■□□□□ 0.52
SHDQ96IW2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.28■□□□□ 0.52
SHDQ96IW2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.28■□□□□ 0.52
SHDQ96IW2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHDQ96IW2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SHDQ96IW2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SHDQ96IW2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHDQ96IW2 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.28■□□□□ 0.52
SHDQ96IW2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHDQ96IW2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHDQ96IW2 AC079776.2-201ENST00000641154 1609 ntBASIC18.27■□□□□ 0.52
SHDQ96IW2 AC097374.2-201ENST00000618617 1306 ntBASIC18.27■□□□□ 0.52
SHDQ96IW2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SHDQ96IW2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SHDQ96IW2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.27■□□□□ 0.52
SHDQ96IW2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.27■□□□□ 0.52
SHDQ96IW2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHDQ96IW2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.27■□□□□ 0.52
SHDQ96IW2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SHDQ96IW2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.27■□□□□ 0.52
SHDQ96IW2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHDQ96IW2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.27■□□□□ 0.52
SHDQ96IW2 AC108751.1-201ENST00000490852 363 ntBASIC18.27■□□□□ 0.52
SHDQ96IW2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.27■□□□□ 0.52
SHDQ96IW2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHDQ96IW2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SHDQ96IW2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHDQ96IW2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.27■□□□□ 0.51
SHDQ96IW2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.27■□□□□ 0.51
SHDQ96IW2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
SHDQ96IW2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.27■□□□□ 0.51
SHDQ96IW2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SHDQ96IW2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SHDQ96IW2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHDQ96IW2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SHDQ96IW2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SHDQ96IW2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.26■□□□□ 0.51
SHDQ96IW2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.26■□□□□ 0.51
SHDQ96IW2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.26■□□□□ 0.51
SHDQ96IW2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.26■□□□□ 0.51
SHDQ96IW2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 AC254562.1-201ENST00000417586 456 ntBASIC18.26■□□□□ 0.51
SHDQ96IW2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.26■□□□□ 0.51
SHDQ96IW2 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.26■□□□□ 0.51
SHDQ96IW2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.26■□□□□ 0.51
SHDQ96IW2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.26■□□□□ 0.51
SHDQ96IW2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.26■□□□□ 0.51
SHDQ96IW2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.26■□□□□ 0.51
SHDQ96IW2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.26■□□□□ 0.51
SHDQ96IW2 AC136632.2-201ENST00000512891 861 ntBASIC18.26■□□□□ 0.51
SHDQ96IW2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHDQ96IW2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.26■□□□□ 0.51
SHDQ96IW2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.26■□□□□ 0.51
SHDQ96IW2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.26■□□□□ 0.51
SHDQ96IW2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
SHDQ96IW2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.26■□□□□ 0.51
SHDQ96IW2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.26■□□□□ 0.51
SHDQ96IW2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.26■□□□□ 0.51
SHDQ96IW2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.26■□□□□ 0.51
SHDQ96IW2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms