Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 AC106795.1-205ENST00000512851 1056 ntBASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.52■■□□□ 1.04
SH3RF3Q8TEJ3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.03
SH3RF3Q8TEJ3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SH3RF3Q8TEJ3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.52■■□□□ 1.03
SH3RF3Q8TEJ3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF3Q8TEJ3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 AIRN-201ENST00000601203 4374 ntBASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 AC009533.2-201ENST00000543664 586 ntBASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 AC018445.3-201ENST00000624177 1945 ntBASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 WIZP1-201ENST00000531444 2299 ntBASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3RF3Q8TEJ3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 INTS4P1-201ENST00000438455 1935 ntBASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 AC011467.2-201ENST00000598425 242 ntBASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 AC093503.3-201ENST00000624917 2352 ntBASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms