Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 RPL13AP23-201ENST00000480739 586 ntBASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 AL355877.3-201ENST00000622820 899 ntBASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 AC099343.3-201ENST00000605834 2503 ntBASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 MIR940-201ENST00000401276 94 ntBASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 RBM17P3-201ENST00000417687 1192 ntBASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 AL049840.3-201ENST00000602669 611 ntBASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC149Q6ZUS6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 LINC00602-201ENST00000629776 2065 ntBASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 KRT18P65-201ENST00000439811 1286 ntBASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 SCARNA2-201ENST00000458748 420 ntBASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 AC092183.1-201ENST00000469884 875 ntBASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 FAM215A-202ENST00000632077 792 ntBASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC149Q6ZUS6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 RPS2P28-201ENST00000314255 741 ntBASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC149Q6ZUS6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC149Q6ZUS6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC149Q6ZUS6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC149Q6ZUS6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms