Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 KRT16P1-201ENST00000399124 1418 ntBASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 KRT18P22-201ENST00000402024 1347 ntBASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXR1Q6PIV2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 KSR1P1-201ENST00000446298 240 ntBASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXR1Q6PIV2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 KRT8P20-201ENST00000423953 1409 ntBASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXR1Q6PIV2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 AL513477.1-201ENST00000602865 2407 ntBASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXR1Q6PIV2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms