Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 KRT8P7-201ENST00000533003 1432 ntBASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 AL135905.2-201ENST00000584934 1404 ntBASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 FAM197Y4-202ENST00000622692 608 ntBASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 AC141586.5-201ENST00000624546 2050 ntBASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RUNDC3AQ59EK9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 AC012313.1-201ENST00000593393 3059 ntBASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 KRT18P23-201ENST00000435622 1283 ntBASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RUNDC3AQ59EK9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RUNDC3AQ59EK9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms