Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.97■□□□□ 0.95
HTRA3P83110 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA3P83110 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HTRA3P83110 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.97■□□□□ 0.95
HTRA3P83110 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA3P83110 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA3P83110 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.97■□□□□ 0.95
HTRA3P83110 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA3P83110 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.97■□□□□ 0.95
HTRA3P83110 AC092919.2-201ENST00000623631 1645 ntBASIC20.96■□□□□ 0.95
HTRA3P83110 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HTRA3P83110 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.96■□□□□ 0.95
HTRA3P83110 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 GPR53P-205ENST00000457298 1084 ntBASIC20.96■□□□□ 0.95
HTRA3P83110 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.96■□□□□ 0.95
HTRA3P83110 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HTRA3P83110 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.96■□□□□ 0.95
HTRA3P83110 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HTRA3P83110 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.96■□□□□ 0.95
HTRA3P83110 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.96■□□□□ 0.95
HTRA3P83110 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.96■□□□□ 0.95
HTRA3P83110 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HTRA3P83110 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.96■□□□□ 0.95
HTRA3P83110 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HTRA3P83110 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HTRA3P83110 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HTRA3P83110 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HTRA3P83110 TEX21P-204ENST00000641479 1693 ntBASIC20.96■□□□□ 0.95
HTRA3P83110 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.95■□□□□ 0.94
HTRA3P83110 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.95■□□□□ 0.94
HTRA3P83110 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
HTRA3P83110 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 SPDYE21P-201ENST00000413323 827 ntBASIC20.95■□□□□ 0.94
HTRA3P83110 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.95■□□□□ 0.94
HTRA3P83110 RPS2P32-201ENST00000439199 892 ntBASIC20.95■□□□□ 0.94
HTRA3P83110 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.95■□□□□ 0.94
HTRA3P83110 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.95■□□□□ 0.94
HTRA3P83110 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.95■□□□□ 0.94
HTRA3P83110 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.95■□□□□ 0.94
HTRA3P83110 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.95■□□□□ 0.94
HTRA3P83110 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA3P83110 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.94■□□□□ 0.94
HTRA3P83110 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.94■□□□□ 0.94
HTRA3P83110 AC107890.1-201ENST00000422478 521 ntBASIC20.94■□□□□ 0.94
HTRA3P83110 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.94■□□□□ 0.94
HTRA3P83110 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.94■□□□□ 0.94
HTRA3P83110 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.94■□□□□ 0.94
HTRA3P83110 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.94■□□□□ 0.94
HTRA3P83110 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 OR7E47P-204ENST00000575924 449 ntBASIC20.94■□□□□ 0.94
HTRA3P83110 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.94■□□□□ 0.94
HTRA3P83110 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.94■□□□□ 0.94
HTRA3P83110 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.94■□□□□ 0.94
HTRA3P83110 AC023141.13-201ENST00000604991 943 ntBASIC20.94■□□□□ 0.94
HTRA3P83110 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.94■□□□□ 0.94
HTRA3P83110 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.94■□□□□ 0.94
HTRA3P83110 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
HTRA3P83110 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.94■□□□□ 0.94
HTRA3P83110 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HTRA3P83110 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.94■□□□□ 0.94
HTRA3P83110 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.94■□□□□ 0.94
HTRA3P83110 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA3P83110 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HTRA3P83110 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA3P83110 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HTRA3P83110 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA3P83110 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA3P83110 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
HTRA3P83110 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA3P83110 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA3P83110 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms