Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPCS3P61009 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPCS3P61009 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SPCS3P61009 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SPCS3P61009 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.83□□□□□ -0.04
SPCS3P61009 MIR935-201ENST00000401179 91 ntBASIC14.83□□□□□ -0.04
SPCS3P61009 AL353807.1-201ENST00000427475 662 ntBASIC14.83□□□□□ -0.04
SPCS3P61009 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.83□□□□□ -0.04
SPCS3P61009 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.83□□□□□ -0.04
SPCS3P61009 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 AC026271.3-201ENST00000571884 352 ntBASIC14.83□□□□□ -0.04
SPCS3P61009 AC011298.2-201ENST00000617989 482 ntBASIC14.83□□□□□ -0.04
SPCS3P61009 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.83□□□□□ -0.04
SPCS3P61009 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.83□□□□□ -0.04
SPCS3P61009 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.83□□□□□ -0.04
SPCS3P61009 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
SPCS3P61009 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SPCS3P61009 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SPCS3P61009 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SPCS3P61009 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.83□□□□□ -0.04
SPCS3P61009 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SPCS3P61009 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPCS3P61009 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.83□□□□□ -0.04
SPCS3P61009 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPCS3P61009 CROCCP1-201ENST00000426910 5675 ntBASIC14.82□□□□□ -0.04
SPCS3P61009 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPCS3P61009 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SPCS3P61009 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 AL355802.2-201ENST00000402069 882 ntBASIC14.82□□□□□ -0.04
SPCS3P61009 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SPCS3P61009 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPCS3P61009 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.82□□□□□ -0.04
SPCS3P61009 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.82□□□□□ -0.04
SPCS3P61009 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.82□□□□□ -0.04
SPCS3P61009 AL031985.4-201ENST00000642138 673 ntBASIC14.82□□□□□ -0.04
SPCS3P61009 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.82□□□□□ -0.04
SPCS3P61009 KRT16P1-201ENST00000399124 1418 ntBASIC14.82□□□□□ -0.04
SPCS3P61009 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SPCS3P61009 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.82□□□□□ -0.04
SPCS3P61009 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SPCS3P61009 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPCS3P61009 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 GMCL1P1-201ENST00000463439 1581 ntBASIC14.81□□□□□ -0.04
SPCS3P61009 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SPCS3P61009 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.81□□□□□ -0.04
SPCS3P61009 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SPCS3P61009 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SPCS3P61009 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SPCS3P61009 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 FAM207BP-201ENST00000447172 505 ntBASIC14.81□□□□□ -0.04
SPCS3P61009 RPS2P4-201ENST00000476944 856 ntBASIC14.81□□□□□ -0.04
SPCS3P61009 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPCS3P61009 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.81□□□□□ -0.04
SPCS3P61009 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.81□□□□□ -0.04
SPCS3P61009 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.81□□□□□ -0.04
SPCS3P61009 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms