Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.4■□□□□ 0.38
VSX2P58304 KRT8P26-201ENST00000534154 1276 ntBASIC17.4■□□□□ 0.38
VSX2P58304 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.4■□□□□ 0.38
VSX2P58304 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.4■□□□□ 0.38
VSX2P58304 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.4■□□□□ 0.38
VSX2P58304 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VSX2P58304 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.4■□□□□ 0.38
VSX2P58304 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.4■□□□□ 0.38
VSX2P58304 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
VSX2P58304 AL138781.2-201ENST00000617896 1843 ntBASIC17.4■□□□□ 0.38
VSX2P58304 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VSX2P58304 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VSX2P58304 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VSX2P58304 AC016734.2-201ENST00000624325 1377 ntBASIC17.4■□□□□ 0.38
VSX2P58304 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VSX2P58304 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VSX2P58304 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
VSX2P58304 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
VSX2P58304 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.39■□□□□ 0.38
VSX2P58304 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VSX2P58304 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.39■□□□□ 0.37
VSX2P58304 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.39■□□□□ 0.37
VSX2P58304 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
VSX2P58304 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.39■□□□□ 0.37
VSX2P58304 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.39■□□□□ 0.37
VSX2P58304 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 AC008687.5-201ENST00000593746 558 ntBASIC17.39■□□□□ 0.37
VSX2P58304 AL390719.2-201ENST00000606993 987 ntBASIC17.39■□□□□ 0.37
VSX2P58304 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.39■□□□□ 0.37
VSX2P58304 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.39■□□□□ 0.37
VSX2P58304 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.39■□□□□ 0.37
VSX2P58304 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.39■□□□□ 0.37
VSX2P58304 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VSX2P58304 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.38■□□□□ 0.37
VSX2P58304 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VSX2P58304 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
VSX2P58304 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
VSX2P58304 TSSC2-201ENST00000450217 709 ntBASIC17.38■□□□□ 0.37
VSX2P58304 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.38■□□□□ 0.37
VSX2P58304 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.38■□□□□ 0.37
VSX2P58304 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.38■□□□□ 0.37
VSX2P58304 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VSX2P58304 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.38■□□□□ 0.37
VSX2P58304 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.38■□□□□ 0.37
VSX2P58304 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.38■□□□□ 0.37
VSX2P58304 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VSX2P58304 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VSX2P58304 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VSX2P58304 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.37■□□□□ 0.37
VSX2P58304 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 HTR7P1-202ENST00000624664 4411 ntBASIC17.37■□□□□ 0.37
VSX2P58304 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.37■□□□□ 0.37
VSX2P58304 ESPNP-201ENST00000270691 2015 ntBASIC17.37■□□□□ 0.37
VSX2P58304 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.37■□□□□ 0.37
VSX2P58304 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VSX2P58304 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms