Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.22■□□□□ 0.67
GSCP56915 AL157888.1-201ENST00000631930 593 ntBASIC19.22■□□□□ 0.67
GSCP56915 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
GSCP56915 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GSCP56915 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.22■□□□□ 0.67
GSCP56915 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
GSCP56915 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.22■□□□□ 0.67
GSCP56915 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GSCP56915 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
GSCP56915 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 FLJ13224-201ENST00000313737 1514 ntBASIC19.21■□□□□ 0.67
GSCP56915 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.21■□□□□ 0.67
GSCP56915 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GSCP56915 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.21■□□□□ 0.67
GSCP56915 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 LIN28AP1-201ENST00000429574 405 ntBASIC19.21■□□□□ 0.67
GSCP56915 COX11P1-201ENST00000489116 835 ntBASIC19.21■□□□□ 0.67
GSCP56915 AC034232.1-201ENST00000506026 1064 ntBASIC19.21■□□□□ 0.67
GSCP56915 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.21■□□□□ 0.67
GSCP56915 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GSCP56915 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.21■□□□□ 0.67
GSCP56915 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 AL023973.1-201ENST00000624619 620 ntBASIC19.21■□□□□ 0.67
GSCP56915 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GSCP56915 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GSCP56915 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GSCP56915 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GSCP56915 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
GSCP56915 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GSCP56915 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GSCP56915 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GSCP56915 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.2■□□□□ 0.66
GSCP56915 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.2■□□□□ 0.66
GSCP56915 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GSCP56915 AC211429.1-201ENST00000415277 523 ntBASIC19.2■□□□□ 0.66
GSCP56915 AL137013.1-201ENST00000432946 1228 ntBASIC19.2■□□□□ 0.66
GSCP56915 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.2■□□□□ 0.66
GSCP56915 BX664615.1-201ENST00000443558 458 ntBASIC19.2■□□□□ 0.66
GSCP56915 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.2■□□□□ 0.66
GSCP56915 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GSCP56915 AL441883.1-201ENST00000566170 1045 ntBASIC19.2■□□□□ 0.66
GSCP56915 AC008687.5-201ENST00000593746 558 ntBASIC19.2■□□□□ 0.66
GSCP56915 LINC01023-201ENST00000606054 436 ntBASIC19.2■□□□□ 0.66
GSCP56915 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GSCP56915 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 AC138028.4-201ENST00000564984 1845 ntBASIC19.2■□□□□ 0.66
GSCP56915 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.2■□□□□ 0.66
GSCP56915 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GSCP56915 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GSCP56915 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GSCP56915 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GSCP56915 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GSCP56915 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
GSCP56915 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 ATP5G1P1-201ENST00000448724 379 ntBASIC19.19■□□□□ 0.66
GSCP56915 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.19■□□□□ 0.66
GSCP56915 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.19■□□□□ 0.66
GSCP56915 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
GSCP56915 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.19■□□□□ 0.66
GSCP56915 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.19■□□□□ 0.66
GSCP56915 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GSCP56915 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms