Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX2-1P43699 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NKX2-1P43699 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NKX2-1P43699 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NKX2-1P43699 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-1P43699 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-1P43699 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NKX2-1P43699 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.91□□□□□ -0.02
NKX2-1P43699 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 TSPY6P-201ENST00000448518 926 ntBASIC14.91□□□□□ -0.02
NKX2-1P43699 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.91□□□□□ -0.02
NKX2-1P43699 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-1P43699 MIR4758-201ENST00000577688 71 ntBASIC14.91□□□□□ -0.02
NKX2-1P43699 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 TNRC18P3-201ENST00000441896 2691 ntBASIC14.91□□□□□ -0.02
NKX2-1P43699 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX2-1P43699 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX2-1P43699 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NKX2-1P43699 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX2-1P43699 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX2-1P43699 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NKX2-1P43699 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.9□□□□□ -0.02
NKX2-1P43699 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX2-1P43699 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 AP000593.1-201ENST00000393668 712 ntBASIC14.9□□□□□ -0.02
NKX2-1P43699 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX2-1P43699 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-1P43699 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.9□□□□□ -0.02
NKX2-1P43699 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.9□□□□□ -0.02
NKX2-1P43699 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.9□□□□□ -0.02
NKX2-1P43699 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NKX2-1P43699 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-1P43699 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX2-1P43699 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX2-1P43699 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX2-1P43699 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX2-1P43699 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NKX2-1P43699 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-1P43699 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
NKX2-1P43699 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NKX2-1P43699 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NKX2-1P43699 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.89□□□□□ -0.03
NKX2-1P43699 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms