Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CHRNA3P32297 AL512604.3-201ENST00000569583 964 ntBASIC19.19■□□□□ 0.66
CHRNA3P32297 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNA3P32297 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNA3P32297 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHRNA3P32297 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA3P32297 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA3P32297 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CHRNA3P32297 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
CHRNA3P32297 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA3P32297 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHRNA3P32297 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNA3P32297 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHRNA3P32297 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA3P32297 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNA3P32297 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.18■□□□□ 0.66
CHRNA3P32297 AP000593.1-201ENST00000393668 712 ntBASIC19.18■□□□□ 0.66
CHRNA3P32297 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNA3P32297 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA3P32297 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.18■□□□□ 0.66
CHRNA3P32297 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA3P32297 AC006011.2-201ENST00000621313 1158 ntBASIC19.18■□□□□ 0.66
CHRNA3P32297 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHRNA3P32297 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNA3P32297 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHRNA3P32297 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA3P32297 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA3P32297 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA3P32297 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 DUX4L26-201ENST00000489078 1255 ntBASIC19.17■□□□□ 0.66
CHRNA3P32297 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRNA3P32297 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA3P32297 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 AL590326.2-201ENST00000625139 305 ntBASIC19.17■□□□□ 0.66
CHRNA3P32297 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRNA3P32297 AC141257.4-201ENST00000634557 245 ntBASIC19.17■□□□□ 0.66
CHRNA3P32297 AC136944.6-201ENST00000634818 245 ntBASIC19.17■□□□□ 0.66
CHRNA3P32297 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRNA3P32297 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA3P32297 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.17■□□□□ 0.66
CHRNA3P32297 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA3P32297 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRNA3P32297 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA3P32297 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA3P32297 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA3P32297 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CHRNA3P32297 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA3P32297 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHRNA3P32297 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms