Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 AC034232.1-201ENST00000506026 1064 ntBASIC21.07■□□□□ 0.96
CTDNEP1O95476 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 AL031432.5-201ENST00000641059 760 ntBASIC21.07■□□□□ 0.96
CTDNEP1O95476 LINC00602-201ENST00000629776 2065 ntBASIC21.07■□□□□ 0.96
CTDNEP1O95476 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTDNEP1O95476 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CTDNEP1O95476 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTDNEP1O95476 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTDNEP1O95476 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 AL136038.4-201ENST00000603606 1261 ntBASIC21.06■□□□□ 0.96
CTDNEP1O95476 LINC01023-201ENST00000606054 436 ntBASIC21.06■□□□□ 0.96
CTDNEP1O95476 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 HYMAI.1-201ENST00000620949 238 ntBASIC21.06■□□□□ 0.96
CTDNEP1O95476 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTDNEP1O95476 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTDNEP1O95476 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTDNEP1O95476 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTDNEP1O95476 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTDNEP1O95476 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CTDNEP1O95476 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 GNAS-203ENST00000306120 1878 ntBASIC21.05■□□□□ 0.96
CTDNEP1O95476 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTDNEP1O95476 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.05■□□□□ 0.96
CTDNEP1O95476 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDNEP1O95476 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDNEP1O95476 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDNEP1O95476 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 RCN1P1-201ENST00000400413 996 ntBASIC21.04■□□□□ 0.96
CTDNEP1O95476 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTDNEP1O95476 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDNEP1O95476 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTDNEP1O95476 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDNEP1O95476 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CTDNEP1O95476 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTDNEP1O95476 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms