Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DDX39AO00148 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX39AO00148 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX39AO00148 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX39AO00148 RN7SL606P-201ENST00000472779 293 ntBASIC20.43■□□□□ 0.86
DDX39AO00148 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.43■□□□□ 0.86
DDX39AO00148 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
DDX39AO00148 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX39AO00148 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX39AO00148 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.43■□□□□ 0.86
DDX39AO00148 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.43■□□□□ 0.86
DDX39AO00148 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX39AO00148 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.42■□□□□ 0.86
DDX39AO00148 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
DDX39AO00148 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DDX39AO00148 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX39AO00148 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX39AO00148 TSPY12P-201ENST00000421279 868 ntBASIC20.42■□□□□ 0.86
DDX39AO00148 AC113404.2-201ENST00000507884 177 ntBASIC20.42■□□□□ 0.86
DDX39AO00148 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.42■□□□□ 0.86
DDX39AO00148 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.42■□□□□ 0.86
DDX39AO00148 KRT126P-201ENST00000549467 1181 ntBASIC20.42■□□□□ 0.86
DDX39AO00148 AC008687.5-201ENST00000593746 558 ntBASIC20.42■□□□□ 0.86
DDX39AO00148 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DDX39AO00148 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
DDX39AO00148 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
DDX39AO00148 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX39AO00148 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX39AO00148 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.41■□□□□ 0.86
DDX39AO00148 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.41■□□□□ 0.86
DDX39AO00148 AC074051.2-201ENST00000565115 352 ntBASIC20.41■□□□□ 0.86
DDX39AO00148 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.41■□□□□ 0.86
DDX39AO00148 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
DDX39AO00148 AL121894.2-201ENST00000602977 491 ntBASIC20.41■□□□□ 0.86
DDX39AO00148 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.41■□□□□ 0.86
DDX39AO00148 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.41■□□□□ 0.86
DDX39AO00148 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.41■□□□□ 0.86
DDX39AO00148 AC233702.3-201ENST00000578656 1387 ntBASIC20.41■□□□□ 0.86
DDX39AO00148 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.41■□□□□ 0.86
DDX39AO00148 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DDX39AO00148 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.41■□□□□ 0.86
DDX39AO00148 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DDX39AO00148 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DDX39AO00148 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX39AO00148 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
DDX39AO00148 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
DDX39AO00148 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
DDX39AO00148 AL845331.1-201ENST00000424978 1190 ntBASIC20.4■□□□□ 0.86
DDX39AO00148 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms