Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 AC111152.3-201ENST00000569699 673 ntBASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 AC233702.3-201ENST00000578656 1387 ntBASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB2Q9Y5E7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 TSPY19P-201ENST00000418461 509 ntBASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 TSPY18P-201ENST00000441642 509 ntBASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AC104819.1-201ENST00000504587 486 ntBASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AC074051.2-201ENST00000565115 352 ntBASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AC004263.2-201ENST00000617183 678 ntBASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB2Q9Y5E7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHB2Q9Y5E7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHB2Q9Y5E7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 FOSL1P1-201ENST00000511041 816 ntBASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 LINC00167-201ENST00000530583 1419 ntBASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 AL732292.2-201ENST00000609649 430 ntBASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB2Q9Y5E7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 SDHAP2-201ENST00000455183 2001 ntBASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 AL845331.1-201ENST00000424978 1190 ntBASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB2Q9Y5E7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms