Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.25■□□□□ 0.19
COPS3Q9UNS2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 SDHAP2-201ENST00000455183 2001 ntBASIC16.25■□□□□ 0.19
COPS3Q9UNS2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 SLC25A1P4-201ENST00000567977 778 ntBASIC16.25■□□□□ 0.19
COPS3Q9UNS2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 MIR4674-201ENST00000582457 87 ntBASIC16.25■□□□□ 0.19
COPS3Q9UNS2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 CD177P1-201ENST00000606252 935 ntBASIC16.25■□□□□ 0.19
COPS3Q9UNS2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 AC012317.2-201ENST00000623305 2251 ntBASIC16.25■□□□□ 0.19
COPS3Q9UNS2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COPS3Q9UNS2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 FAM197Y4-202ENST00000622692 608 ntBASIC16.24■□□□□ 0.19
COPS3Q9UNS2 PKD1P1-201ENST00000458669 6805 ntBASIC16.24■□□□□ 0.19
COPS3Q9UNS2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COPS3Q9UNS2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.23■□□□□ 0.19
COPS3Q9UNS2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms