Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 AC133963.1-201ENST00000504166 1679 ntBASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMBRD1Q9NUN5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 MIR149-201ENST00000384879 89 ntBASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 MCCD1P1-208ENST00000445732 328 ntBASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 AL353708.3-201ENST00000610272 989 ntBASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 AC018695.7-201ENST00000624587 2492 ntBASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMBRD1Q9NUN5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 AIRN-201ENST00000601203 4374 ntBASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 AC239809.2-201ENST00000415381 517 ntBASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 KRT17P3-201ENST00000420566 1262 ntBASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 KSR1P1-201ENST00000446298 240 ntBASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 AC011506.1-201ENST00000474329 610 ntBASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMBRD1Q9NUN5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.89■□□□□ 0.94
LMBRD1Q9NUN5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LMBRD1Q9NUN5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.89■□□□□ 0.94
LMBRD1Q9NUN5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 FAM207BP-201ENST00000447172 505 ntBASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 AC142086.2-201ENST00000569753 217 ntBASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
LMBRD1Q9NUN5 AC036111.1-201ENST00000533973 1582 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms