Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 AL138966.2-201ENST00000621997 464 ntBASIC17.43■□□□□ 0.38
BRF2Q9HAW0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 BCL2-203ENST00000589955 5011 ntBASIC17.43■□□□□ 0.38
BRF2Q9HAW0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRF2Q9HAW0 KRT18P55-202ENST00000578578 1546 ntBASIC17.42■□□□□ 0.38
BRF2Q9HAW0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 SLC25A3P1-201ENST00000443844 931 ntBASIC17.41■□□□□ 0.38
BRF2Q9HAW0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 AC034232.1-201ENST00000506026 1064 ntBASIC17.41■□□□□ 0.38
BRF2Q9HAW0 DUTP2-201ENST00000519164 463 ntBASIC17.41■□□□□ 0.38
BRF2Q9HAW0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.41■□□□□ 0.38
BRF2Q9HAW0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 AC067852.2-201ENST00000590513 2313 ntBASIC17.4■□□□□ 0.38
BRF2Q9HAW0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRF2Q9HAW0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms