Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 TSPY17P-201ENST00000450329 467 ntBASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 AC141586.5-201ENST00000624546 2050 ntBASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 ATP5G1P1-201ENST00000448724 379 ntBASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 CA15P1-201ENST00000481698 905 ntBASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIN28AQ9H9Z2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 AC073508.3-201ENST00000619697 1419 ntBASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN28AQ9H9Z2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms