Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 AC124283.5-201ENST00000624661 1809 ntBASIC17.36■□□□□ 0.37
VCX3BQ9H321 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 CYP2T3P-201ENST00000601990 817 ntBASIC17.36■□□□□ 0.37
VCX3BQ9H321 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 AL096828.2-201ENST00000567259 1965 ntBASIC17.36■□□□□ 0.37
VCX3BQ9H321 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.36■□□□□ 0.37
VCX3BQ9H321 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VCX3BQ9H321 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 PCDHB19P-201ENST00000570871 2371 ntBASIC17.35■□□□□ 0.37
VCX3BQ9H321 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 MIR939-201ENST00000401314 82 ntBASIC17.35■□□□□ 0.37
VCX3BQ9H321 AL356441.2-201ENST00000443009 864 ntBASIC17.35■□□□□ 0.37
VCX3BQ9H321 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 AL589743.5-201ENST00000616611 1050 ntBASIC17.35■□□□□ 0.37
VCX3BQ9H321 AC010536.3-201ENST00000620306 533 ntBASIC17.35■□□□□ 0.37
VCX3BQ9H321 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 AP006587.1-201ENST00000534129 1502 ntBASIC17.35■□□□□ 0.37
VCX3BQ9H321 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms