Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS11Q9H270 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS11Q9H270 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS11Q9H270 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS11Q9H270 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
VPS11Q9H270 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 AC108860.2-201ENST00000562760 2183 ntBASIC18.35■□□□□ 0.53
VPS11Q9H270 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS11Q9H270 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VPS11Q9H270 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS11Q9H270 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
VPS11Q9H270 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VPS11Q9H270 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.34■□□□□ 0.53
VPS11Q9H270 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
VPS11Q9H270 MESTP1-201ENST00000404287 994 ntBASIC18.34■□□□□ 0.53
VPS11Q9H270 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VPS11Q9H270 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
VPS11Q9H270 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.34■□□□□ 0.53
VPS11Q9H270 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS11Q9H270 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VPS11Q9H270 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VPS11Q9H270 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS11Q9H270 GPAT2P1-201ENST00000444924 1672 ntBASIC18.34■□□□□ 0.53
VPS11Q9H270 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS11Q9H270 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS11Q9H270 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VPS11Q9H270 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.33■□□□□ 0.53
VPS11Q9H270 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.33■□□□□ 0.53
VPS11Q9H270 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
VPS11Q9H270 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS11Q9H270 AL096828.2-201ENST00000567259 1965 ntBASIC18.33■□□□□ 0.53
VPS11Q9H270 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VPS11Q9H270 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VPS11Q9H270 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS11Q9H270 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.33■□□□□ 0.53
VPS11Q9H270 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS11Q9H270 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
VPS11Q9H270 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS11Q9H270 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
VPS11Q9H270 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS11Q9H270 PCDHA12-202ENST00000613593 2588 ntBASIC18.33■□□□□ 0.52
VPS11Q9H270 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS11Q9H270 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS11Q9H270 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS11Q9H270 AP000593.1-201ENST00000393668 712 ntBASIC18.33■□□□□ 0.52
VPS11Q9H270 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS11Q9H270 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS11Q9H270 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.33■□□□□ 0.52
VPS11Q9H270 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.33■□□□□ 0.52
VPS11Q9H270 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS11Q9H270 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.33■□□□□ 0.52
VPS11Q9H270 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS11Q9H270 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS11Q9H270 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
VPS11Q9H270 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS11Q9H270 AC099398.1-201ENST00000567919 2776 ntBASIC18.33■□□□□ 0.52
VPS11Q9H270 GMCL1P1-201ENST00000463439 1581 ntBASIC18.33■□□□□ 0.52
VPS11Q9H270 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.33■□□□□ 0.52
VPS11Q9H270 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS11Q9H270 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS11Q9H270 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.33■□□□□ 0.52
VPS11Q9H270 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
VPS11Q9H270 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS11Q9H270 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
VPS11Q9H270 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VPS11Q9H270 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VPS11Q9H270 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS11Q9H270 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms