Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 WWOX-216ENST00000569818 525 ntBASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 AP005242.2-201ENST00000580065 1175 ntBASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 AL023803.3-201ENST00000615559 522 ntBASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPPED1Q9BRF8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 ABHD17AP1-201ENST00000358206 933 ntBASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 AC080080.1-201ENST00000625121 2420 ntBASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPPED1Q9BRF8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 AC009053.2-201ENST00000563701 2365 ntBASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 RPS2P55-201ENST00000397318 883 ntBASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 AC107956.1-201ENST00000494359 873 ntBASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 AP003041.3-201ENST00000527151 707 ntBASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 ITM2C-210ENST00000620962 501 ntBASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms