Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NOTCH4Q99466 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NOTCH4Q99466 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
NOTCH4Q99466 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NOTCH4Q99466 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 AC093909.1-201ENST00000504731 1122 ntBASIC18.69■□□□□ 0.58
NOTCH4Q99466 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NOTCH4Q99466 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NOTCH4Q99466 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.68■□□□□ 0.58
NOTCH4Q99466 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.68■□□□□ 0.58
NOTCH4Q99466 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.68■□□□□ 0.58
NOTCH4Q99466 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.68■□□□□ 0.58
NOTCH4Q99466 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NOTCH4Q99466 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.68■□□□□ 0.58
NOTCH4Q99466 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.68■□□□□ 0.58
NOTCH4Q99466 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NOTCH4Q99466 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 BX842568.4-201ENST00000421222 227 ntBASIC18.67■□□□□ 0.58
NOTCH4Q99466 AC092910.1-201ENST00000482027 1129 ntBASIC18.67■□□□□ 0.58
NOTCH4Q99466 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 AC027601.4-201ENST00000611259 610 ntBASIC18.67■□□□□ 0.58
NOTCH4Q99466 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.67■□□□□ 0.58
NOTCH4Q99466 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 MIR1233-2-201ENST00000408138 82 ntBASIC18.67■□□□□ 0.58
NOTCH4Q99466 MIR1233-1-201ENST00000408722 82 ntBASIC18.67■□□□□ 0.58
NOTCH4Q99466 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 Z83851.2-201ENST00000609564 659 ntBASIC18.67■□□□□ 0.58
NOTCH4Q99466 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.67■□□□□ 0.58
NOTCH4Q99466 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NOTCH4Q99466 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NOTCH4Q99466 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NOTCH4Q99466 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NOTCH4Q99466 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NOTCH4Q99466 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NOTCH4Q99466 AC093010.1-201ENST00000473625 1624 ntBASIC18.66■□□□□ 0.58
NOTCH4Q99466 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NOTCH4Q99466 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NOTCH4Q99466 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NOTCH4Q99466 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms