Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 AL109659.2-201ENST00000606809 1674 ntBASIC14.79□□□□□ -0.04
RAB40CQ96S21 AC084018.2-201ENST00000613093 2607 ntBASIC14.79□□□□□ -0.04
RAB40CQ96S21 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40CQ96S21 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAB40CQ96S21 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 PP12613-201ENST00000424958 2230 ntBASIC14.78□□□□□ -0.04
RAB40CQ96S21 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40CQ96S21 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB40CQ96S21 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB40CQ96S21 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
RAB40CQ96S21 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB40CQ96S21 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40CQ96S21 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RAB40CQ96S21 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB40CQ96S21 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.77□□□□□ -0.05
RAB40CQ96S21 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RAB40CQ96S21 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RAB40CQ96S21 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB40CQ96S21 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40CQ96S21 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40CQ96S21 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms