Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 PRSS29P-201ENST00000440800 595 ntBASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 SIGLEC30P-201ENST00000455569 941 ntBASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 AC022494.1-201ENST00000466044 728 ntBASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 AC107918.4-202ENST00000641623 219 ntBASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 AC245100.3-201ENST00000441281 285 ntBASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 AC064836.3-201ENST00000607928 673 ntBASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 AJ011932.1-201ENST00000621707 465 ntBASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 AC093484.2-201ENST00000580996 2166 ntBASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD1Q96PZ7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
CSMD1Q96PZ7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 AL606495.2-201ENST00000605867 535 ntBASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 RCC2P3-201ENST00000418112 1537 ntBASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 AP000867.4-201ENST00000641616 219 ntBASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSMD1Q96PZ7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms