Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.53■□□□□ 0.4
VPS33AQ96AX1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 MCCD1P1-208ENST00000445732 328 ntBASIC17.52■□□□□ 0.4
VPS33AQ96AX1 AC128676.1-201ENST00000454392 318 ntBASIC17.52■□□□□ 0.4
VPS33AQ96AX1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.52■□□□□ 0.4
VPS33AQ96AX1 MIR4651-201ENST00000582622 73 ntBASIC17.52■□□□□ 0.4
VPS33AQ96AX1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.52■□□□□ 0.39
VPS33AQ96AX1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
VPS33AQ96AX1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VPS33AQ96AX1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VPS33AQ96AX1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.52■□□□□ 0.39
VPS33AQ96AX1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VPS33AQ96AX1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VPS33AQ96AX1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.52■□□□□ 0.39
VPS33AQ96AX1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 AC034236.2-201ENST00000606662 1610 ntBASIC17.51■□□□□ 0.39
VPS33AQ96AX1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS33AQ96AX1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.5■□□□□ 0.39
VPS33AQ96AX1 AP000692.2-201ENST00000608391 879 ntBASIC17.5■□□□□ 0.39
VPS33AQ96AX1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms