Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 AC091812.2-201ENST00000619081 385 ntBASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 SPDYE21P-201ENST00000413323 827 ntBASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 ADH5P3-201ENST00000433842 1137 ntBASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 MIR4745-201ENST00000577608 62 ntBASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 LINC00628-201ENST00000628516 1289 ntBASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 AC099343.3-201ENST00000605834 2503 ntBASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 AC148477.5-201ENST00000625164 1645 ntBASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 AJ011932.1-201ENST00000621707 465 ntBASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.19□□□□□ -0.46
ALMS1Q8TCU4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 SDHAP2-201ENST00000455183 2001 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AC092474.2-201ENST00000424288 719 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AC069262.1-201ENST00000539058 672 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AC022145.2-201ENST00000598203 171 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AL589182.2-201ENST00000619332 1049 ntBASIC12.18□□□□□ -0.46
ALMS1Q8TCU4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms