Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.64□□□□□ -0.23
NUP35Q8NFH5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NUP35Q8NFH5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 AL138688.1-201ENST00000624851 1594 ntBASIC13.62□□□□□ -0.23
NUP35Q8NFH5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 AL355312.1-201ENST00000407115 2176 ntBASIC13.62□□□□□ -0.23
NUP35Q8NFH5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 CROCCP2-202ENST00000412962 2773 ntBASIC13.62□□□□□ -0.23
NUP35Q8NFH5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 NTF6G-201ENST00000591094 616 ntBASIC13.62□□□□□ -0.23
NUP35Q8NFH5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP35Q8NFH5 KRT8P3-201ENST00000519669 1449 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms