Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 MIR3687-2-201ENST00000577708 61 ntBASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 MIR3687-1-201ENST00000614492 61 ntBASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHDC9Q8NEP7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 RNA5SP416-201ENST00000516838 111 ntBASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC9Q8NEP7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
KLHDC9Q8NEP7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.02■□□□□ 0.79
KLHDC9Q8NEP7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
KLHDC9Q8NEP7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
KLHDC9Q8NEP7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 AC007967.3-201ENST00000434308 558 ntBASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 AC004967.1-201ENST00000453589 447 ntBASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 AC079776.2-201ENST00000641154 1609 ntBASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.01■□□□□ 0.79
KLHDC9Q8NEP7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 KRT18P27-201ENST00000427733 1299 ntBASIC20■□□□□ 0.79
KLHDC9Q8NEP7 AC007967.2-201ENST00000432613 625 ntBASIC20■□□□□ 0.79
KLHDC9Q8NEP7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 AL355385.1-201ENST00000606123 409 ntBASIC20■□□□□ 0.79
KLHDC9Q8NEP7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC9Q8NEP7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 RPS8P6-201ENST00000426177 609 ntBASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.99■□□□□ 0.79
KLHDC9Q8NEP7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms