Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC007967.2-201ENST00000432613 625 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 CYMP-203ENST00000474680 1263 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 RNA5SP416-201ENST00000516838 111 ntBASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFAP43Q8NDM7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 LBH-203ENST00000404397 543 ntTSL 4 BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 AC079781.4-201ENST00000641908 219 ntBASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 AP005117.1-201ENST00000584346 1413 ntBASIC28.33■■■□□ 2.13
CFAP43Q8NDM7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC28.33■■■□□ 2.12
CFAP43Q8NDM7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 AC008687.5-201ENST00000593746 558 ntBASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC28.32■■■□□ 2.12
CFAP43Q8NDM7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CFAP43Q8NDM7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 AC093010.1-201ENST00000473625 1624 ntBASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC28.3■■■□□ 2.12
CFAP43Q8NDM7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 ALG1L5P-201ENST00000482043 771 ntBASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms