Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 HCG4P8-203ENST00000443049 980 ntBASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 GUSBP12-201ENST00000513727 720 ntBASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 AP005901.3-202ENST00000581653 237 ntBASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 AC092329.2-201ENST00000598402 547 ntBASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 AL020996.1-203ENST00000536896 2307 ntBASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 AL096828.2-201ENST00000567259 1965 ntBASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ARHGEF39Q8N4T4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ARHGEF39Q8N4T4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ARHGEF39Q8N4T4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
ARHGEF39Q8N4T4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 TSPY12P-201ENST00000421279 868 ntBASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 AC091607.1-201ENST00000490318 1060 ntBASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 IGHV3-41-201ENST00000613121 348 ntBASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 AC124864.1-201ENST00000623408 392 ntBASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 RNF165-205ENST00000588679 2904 ntBASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ARHGEF39Q8N4T4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 DUTP2-201ENST00000519164 463 ntBASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms