Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 AP005901.3-202ENST00000581653 237 ntBASIC19.29■□□□□ 0.68
RNF135Q8IUD6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF135Q8IUD6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 MINOS1P3-201ENST00000457048 203 ntBASIC19.28■□□□□ 0.68
RNF135Q8IUD6 RN7SL606P-201ENST00000472779 293 ntBASIC19.28■□□□□ 0.68
RNF135Q8IUD6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 AL049840.3-201ENST00000602669 611 ntBASIC19.28■□□□□ 0.68
RNF135Q8IUD6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF135Q8IUD6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms