Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.91□□□□□ -0.34
RPL39P62891 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.91□□□□□ -0.34
RPL39P62891 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.91□□□□□ -0.34
RPL39P62891 AC004264.1-201ENST00000608354 794 ntBASIC12.91□□□□□ -0.34
RPL39P62891 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.91□□□□□ -0.34
RPL39P62891 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.91□□□□□ -0.34
RPL39P62891 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.91□□□□□ -0.34
RPL39P62891 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RPL39P62891 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RPL39P62891 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RPL39P62891 PHGDH-209ENST00000641074 1780 ntBASIC12.91□□□□□ -0.34
RPL39P62891 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RPL39P62891 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RPL39P62891 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RPL39P62891 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.91□□□□□ -0.34
RPL39P62891 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RPL39P62891 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RPL39P62891 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RPL39P62891 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RPL39P62891 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
RPL39P62891 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.91□□□□□ -0.34
RPL39P62891 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 GMCL1P1-201ENST00000463439 1581 ntBASIC12.9□□□□□ -0.34
RPL39P62891 AC006116.8-202ENST00000587620 1550 ntBASIC12.9□□□□□ -0.34
RPL39P62891 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RPL39P62891 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.9□□□□□ -0.34
RPL39P62891 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
RPL39P62891 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.9□□□□□ -0.34
RPL39P62891 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.9□□□□□ -0.34
RPL39P62891 MIR4758-201ENST00000577688 71 ntBASIC12.9□□□□□ -0.34
RPL39P62891 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 NKILA-202ENST00000614771 2598 ntBASIC12.9□□□□□ -0.34
RPL39P62891 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RPL39P62891 AC011676.5-201ENST00000624864 2660 ntBASIC12.9□□□□□ -0.34
RPL39P62891 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RPL39P62891 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RPL39P62891 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RPL39P62891 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
RPL39P62891 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
RPL39P62891 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.9□□□□□ -0.35
RPL39P62891 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RPL39P62891 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.9□□□□□ -0.35
RPL39P62891 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
RPL39P62891 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RPL39P62891 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.89□□□□□ -0.35
RPL39P62891 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RPL39P62891 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.89□□□□□ -0.35
RPL39P62891 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RPL39P62891 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RPL39P62891 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RPL39P62891 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RPL39P62891 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RPL39P62891 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.89□□□□□ -0.35
RPL39P62891 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RPL39P62891 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
RPL39P62891 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RPL39P62891 PRSS44-201ENST00000515154 1146 ntBASIC12.89□□□□□ -0.35
RPL39P62891 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.89□□□□□ -0.35
RPL39P62891 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms