Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH12P55289 AL049637.2-201ENST00000641778 930 ntBASIC17.01■□□□□ 0.31
CDH12P55289 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDH12P55289 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH12P55289 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH12P55289 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH12P55289 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
CDH12P55289 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17■□□□□ 0.31
CDH12P55289 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CDH12P55289 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CDH12P55289 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDH12P55289 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17■□□□□ 0.31
CDH12P55289 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CDH12P55289 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH12P55289 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDH12P55289 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH12P55289 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH12P55289 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17■□□□□ 0.31
CDH12P55289 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH12P55289 AC097488.1-201ENST00000507834 756 ntBASIC17■□□□□ 0.31
CDH12P55289 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17■□□□□ 0.31
CDH12P55289 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17■□□□□ 0.31
CDH12P55289 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17■□□□□ 0.31
CDH12P55289 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17■□□□□ 0.31
CDH12P55289 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17■□□□□ 0.31
CDH12P55289 FST-202ENST00000396947 2538 ntTSL 5 BASIC17■□□□□ 0.31
CDH12P55289 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH12P55289 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH12P55289 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH12P55289 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 AL023284.2-201ENST00000405850 579 ntBASIC16.99■□□□□ 0.31
CDH12P55289 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH12P55289 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH12P55289 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 REXO1L10P-201ENST00000615707 1290 ntBASIC16.99■□□□□ 0.31
CDH12P55289 REXO1L12P-201ENST00000622156 912 ntBASIC16.99■□□□□ 0.31
CDH12P55289 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CDH12P55289 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDH12P55289 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH12P55289 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH12P55289 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH12P55289 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH12P55289 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH12P55289 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH12P55289 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 GMCL1P1-201ENST00000463439 1581 ntBASIC16.98■□□□□ 0.31
CDH12P55289 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CDH12P55289 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDH12P55289 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CDH12P55289 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH12P55289 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms