Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
LIMK2P53671 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LIMK2P53671 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.38■□□□□ 0.53
LIMK2P53671 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 MIR3180-5-201ENST00000583743 153 ntBASIC18.38■□□□□ 0.53
LIMK2P53671 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LIMK2P53671 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.38■□□□□ 0.53
LIMK2P53671 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
LIMK2P53671 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LIMK2P53671 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.38■□□□□ 0.53
LIMK2P53671 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LIMK2P53671 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LIMK2P53671 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIMK2P53671 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.38■□□□□ 0.53
LIMK2P53671 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.37■□□□□ 0.53
LIMK2P53671 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 GNAS-203ENST00000306120 1878 ntBASIC18.37■□□□□ 0.53
LIMK2P53671 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LIMK2P53671 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LIMK2P53671 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 AL031133.1-201ENST00000406807 723 ntBASIC18.37■□□□□ 0.53
LIMK2P53671 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.37■□□□□ 0.53
LIMK2P53671 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.37■□□□□ 0.53
LIMK2P53671 AC140113.3-201ENST00000605663 199 ntBASIC18.37■□□□□ 0.53
LIMK2P53671 AC091076.1-201ENST00000610741 619 ntBASIC18.37■□□□□ 0.53
LIMK2P53671 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 AL096828.2-201ENST00000567259 1965 ntBASIC18.37■□□□□ 0.53
LIMK2P53671 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 AC134043.2-201ENST00000624206 2238 ntBASIC18.37■□□□□ 0.53
LIMK2P53671 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.37■□□□□ 0.53
LIMK2P53671 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIMK2P53671 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LIMK2P53671 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LIMK2P53671 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.36■□□□□ 0.53
LIMK2P53671 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.36■□□□□ 0.53
LIMK2P53671 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LIMK2P53671 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.36■□□□□ 0.53
LIMK2P53671 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.36■□□□□ 0.53
LIMK2P53671 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LIMK2P53671 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.36■□□□□ 0.53
LIMK2P53671 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.36■□□□□ 0.53
LIMK2P53671 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.36■□□□□ 0.53
LIMK2P53671 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.36■□□□□ 0.53
LIMK2P53671 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.36■□□□□ 0.53
LIMK2P53671 MIR4674-201ENST00000582457 87 ntBASIC18.36■□□□□ 0.53
LIMK2P53671 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LIMK2P53671 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 AL358472.4-201ENST00000633140 710 ntBASIC18.36■□□□□ 0.53
LIMK2P53671 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIMK2P53671 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.35■□□□□ 0.53
LIMK2P53671 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
LIMK2P53671 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIMK2P53671 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms