Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 AL096828.2-201ENST00000567259 1965 ntBASIC19.68■□□□□ 0.74
TNFSF9P41273 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF9P41273 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFSF9P41273 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF9P41273 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFSF9P41273 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TNFSF9P41273 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFSF9P41273 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF9P41273 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFSF9P41273 AL845331.1-201ENST00000424978 1190 ntBASIC19.67■□□□□ 0.74
TNFSF9P41273 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF9P41273 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFSF9P41273 AC092329.2-201ENST00000598402 547 ntBASIC19.67■□□□□ 0.74
TNFSF9P41273 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFSF9P41273 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF9P41273 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TNFSF9P41273 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF9P41273 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF9P41273 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFSF9P41273 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TNFSF9P41273 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF9P41273 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF9P41273 AC093010.1-201ENST00000473625 1624 ntBASIC19.66■□□□□ 0.74
TNFSF9P41273 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.66■□□□□ 0.74
TNFSF9P41273 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TNFSF9P41273 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.66■□□□□ 0.74
TNFSF9P41273 TSPY12P-201ENST00000421279 868 ntBASIC19.66■□□□□ 0.74
TNFSF9P41273 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF9P41273 AC091607.1-201ENST00000490318 1060 ntBASIC19.66■□□□□ 0.74
TNFSF9P41273 KRT18P56-201ENST00000507275 550 ntBASIC19.66■□□□□ 0.74
TNFSF9P41273 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFSF9P41273 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TNFSF9P41273 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.66■□□□□ 0.74
TNFSF9P41273 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TNFSF9P41273 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TNFSF9P41273 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFSF9P41273 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF9P41273 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFSF9P41273 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
TNFSF9P41273 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF9P41273 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF9P41273 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF9P41273 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF9P41273 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFSF9P41273 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TNFSF9P41273 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
TNFSF9P41273 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFSF9P41273 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 DRAXINP1-201ENST00000437611 948 ntBASIC19.65■□□□□ 0.74
TNFSF9P41273 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TNFSF9P41273 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TNFSF9P41273 TOB2P1-201ENST00000469761 992 ntBASIC19.65■□□□□ 0.74
TNFSF9P41273 GUSBP12-201ENST00000513727 720 ntBASIC19.65■□□□□ 0.74
TNFSF9P41273 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.65■□□□□ 0.74
TNFSF9P41273 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF9P41273 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF9P41273 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF9P41273 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TNFSF9P41273 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF9P41273 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms