Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CNGA1P29973 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.7■□□□□ 0.9
CNGA1P29973 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.7■□□□□ 0.9
CNGA1P29973 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.7■□□□□ 0.9
CNGA1P29973 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.7■□□□□ 0.9
CNGA1P29973 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CNGA1P29973 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.69■□□□□ 0.9
CNGA1P29973 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.69■□□□□ 0.9
CNGA1P29973 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.69■□□□□ 0.9
CNGA1P29973 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.69■□□□□ 0.9
CNGA1P29973 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.69■□□□□ 0.9
CNGA1P29973 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 AL049840.3-201ENST00000602669 611 ntBASIC20.69■□□□□ 0.9
CNGA1P29973 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.69■□□□□ 0.9
CNGA1P29973 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.69■□□□□ 0.9
CNGA1P29973 Z98044.1-201ENST00000632503 1764 ntBASIC20.69■□□□□ 0.9
CNGA1P29973 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.69■□□□□ 0.9
CNGA1P29973 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNGA1P29973 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.68■□□□□ 0.9
CNGA1P29973 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CNGA1P29973 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.68■□□□□ 0.9
CNGA1P29973 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.68■□□□□ 0.9
CNGA1P29973 AC073648.2-201ENST00000510116 352 ntBASIC20.68■□□□□ 0.9
CNGA1P29973 AC139887.3-201ENST00000568585 713 ntBASIC20.68■□□□□ 0.9
CNGA1P29973 AC114341.1-201ENST00000618070 349 ntBASIC20.68■□□□□ 0.9
CNGA1P29973 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CNGA1P29973 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.68■□□□□ 0.9
CNGA1P29973 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNGA1P29973 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.68■□□□□ 0.9
CNGA1P29973 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNGA1P29973 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 BX842568.4-201ENST00000421222 227 ntBASIC20.67■□□□□ 0.9
CNGA1P29973 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.67■□□□□ 0.9
CNGA1P29973 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.67■□□□□ 0.9
CNGA1P29973 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.67■□□□□ 0.9
CNGA1P29973 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CNGA1P29973 AC068587.9-201ENST00000641814 219 ntBASIC20.67■□□□□ 0.9
CNGA1P29973 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.67■□□□□ 0.9
CNGA1P29973 AP000974.1-201ENST00000623909 2387 ntBASIC20.67■□□□□ 0.9
CNGA1P29973 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.67■□□□□ 0.9
CNGA1P29973 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNGA1P29973 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.66■□□□□ 0.9
CNGA1P29973 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.66■□□□□ 0.9
CNGA1P29973 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.66■□□□□ 0.9
CNGA1P29973 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CNGA1P29973 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNGA1P29973 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CNGA1P29973 AL020996.1-203ENST00000536896 2307 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms