Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MMP8P22894 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MMP8P22894 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 AC067852.2-201ENST00000590513 2313 ntBASIC19.16■□□□□ 0.66
MMP8P22894 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.16■□□□□ 0.66
MMP8P22894 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MMP8P22894 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.16■□□□□ 0.66
MMP8P22894 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.16■□□□□ 0.66
MMP8P22894 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.16■□□□□ 0.66
MMP8P22894 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 DUTP2-201ENST00000519164 463 ntBASIC19.16■□□□□ 0.66
MMP8P22894 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.16■□□□□ 0.66
MMP8P22894 AL136038.4-201ENST00000603606 1261 ntBASIC19.16■□□□□ 0.66
MMP8P22894 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.16■□□□□ 0.66
MMP8P22894 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MMP8P22894 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MMP8P22894 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP8P22894 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
MMP8P22894 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.16■□□□□ 0.66
MMP8P22894 LINC00167-201ENST00000530583 1419 ntBASIC19.16■□□□□ 0.66
MMP8P22894 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MMP8P22894 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP8P22894 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP8P22894 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.15■□□□□ 0.66
MMP8P22894 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MMP8P22894 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
MMP8P22894 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.15■□□□□ 0.66
MMP8P22894 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MMP8P22894 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
MMP8P22894 RNF152P1-201ENST00000397754 604 ntBASIC19.15■□□□□ 0.66
MMP8P22894 TSPY5P-201ENST00000426936 936 ntBASIC19.15■□□□□ 0.66
MMP8P22894 HLA-F-220ENST00000434407 884 ntBASIC19.15■□□□□ 0.66
MMP8P22894 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.15■□□□□ 0.66
MMP8P22894 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP8P22894 AC113404.2-201ENST00000507884 177 ntBASIC19.15■□□□□ 0.66
MMP8P22894 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.15■□□□□ 0.66
MMP8P22894 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP8P22894 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.15■□□□□ 0.66
MMP8P22894 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP8P22894 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
MMP8P22894 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP8P22894 KRT89P-201ENST00000620027 1478 ntBASIC19.15■□□□□ 0.66
MMP8P22894 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.14■□□□□ 0.66
MMP8P22894 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
MMP8P22894 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP8P22894 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
MMP8P22894 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP8P22894 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MMP8P22894 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP8P22894 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.14■□□□□ 0.65
MMP8P22894 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MMP8P22894 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.14■□□□□ 0.65
MMP8P22894 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 AC024563.2-201ENST00000603282 481 ntBASIC19.14■□□□□ 0.65
MMP8P22894 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
MMP8P22894 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MMP8P22894 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
MMP8P22894 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.14■□□□□ 0.65
MMP8P22894 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.14■□□□□ 0.65
MMP8P22894 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MMP8P22894 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
MMP8P22894 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
MMP8P22894 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP8P22894 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MMP8P22894 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.13■□□□□ 0.65
MMP8P22894 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP8P22894 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP8P22894 AC104076.2-201ENST00000448912 469 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms