Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA1P02708 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA1P02708 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA1P02708 AC093909.1-201ENST00000504731 1122 ntBASIC19.77■□□□□ 0.76
CHRNA1P02708 AC073648.2-201ENST00000510116 352 ntBASIC19.77■□□□□ 0.76
CHRNA1P02708 AC112698.1-201ENST00000510299 916 ntBASIC19.77■□□□□ 0.76
CHRNA1P02708 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.77■□□□□ 0.76
CHRNA1P02708 AC106730.1-201ENST00000566722 1090 ntBASIC19.77■□□□□ 0.76
CHRNA1P02708 AC139887.3-201ENST00000568585 713 ntBASIC19.77■□□□□ 0.76
CHRNA1P02708 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
CHRNA1P02708 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CHRNA1P02708 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CHRNA1P02708 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA1P02708 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA1P02708 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA1P02708 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA1P02708 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA1P02708 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA1P02708 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CHRNA1P02708 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA1P02708 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA1P02708 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNA1P02708 ABCD1P5-201ENST00000445663 754 ntBASIC19.76■□□□□ 0.75
CHRNA1P02708 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNA1P02708 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA1P02708 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.76■□□□□ 0.75
CHRNA1P02708 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.76■□□□□ 0.75
CHRNA1P02708 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.76■□□□□ 0.75
CHRNA1P02708 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CHRNA1P02708 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.76■□□□□ 0.75
CHRNA1P02708 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA1P02708 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA1P02708 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA1P02708 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA1P02708 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA1P02708 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA1P02708 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA1P02708 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.76■□□□□ 0.75
CHRNA1P02708 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA1P02708 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA1P02708 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA1P02708 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA1P02708 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA1P02708 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.75■□□□□ 0.75
CHRNA1P02708 RPL13AP23-201ENST00000480739 586 ntBASIC19.75■□□□□ 0.75
CHRNA1P02708 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA1P02708 SART3-203ENST00000546611 1184 ntBASIC19.75■□□□□ 0.75
CHRNA1P02708 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA1P02708 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.75■□□□□ 0.75
CHRNA1P02708 AC021087.4-201ENST00000563761 564 ntBASIC19.75■□□□□ 0.75
CHRNA1P02708 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA1P02708 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.75■□□□□ 0.75
CHRNA1P02708 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA1P02708 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.75■□□□□ 0.75
CHRNA1P02708 AC116407.3-201ENST00000623905 1129 ntBASIC19.75■□□□□ 0.75
CHRNA1P02708 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA1P02708 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA1P02708 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA1P02708 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CHRNA1P02708 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA1P02708 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA1P02708 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA1P02708 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA1P02708 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHRNA1P02708 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHRNA1P02708 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.74■□□□□ 0.75
CHRNA1P02708 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA1P02708 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA1P02708 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHRNA1P02708 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHRNA1P02708 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.74■□□□□ 0.75
CHRNA1P02708 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA1P02708 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA1P02708 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA1P02708 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.74■□□□□ 0.75
CHRNA1P02708 AC117500.6-201ENST00000624871 588 ntBASIC19.74■□□□□ 0.75
CHRNA1P02708 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms