Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLPTM1O96005 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.22■□□□□ 0.35
CLPTM1O96005 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.22■□□□□ 0.35
CLPTM1O96005 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.22■□□□□ 0.35
CLPTM1O96005 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CLPTM1O96005 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.22■□□□□ 0.35
CLPTM1O96005 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.22■□□□□ 0.35
CLPTM1O96005 AC005829.2-201ENST00000571422 1056 ntBASIC17.22■□□□□ 0.35
CLPTM1O96005 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.22■□□□□ 0.35
CLPTM1O96005 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.22■□□□□ 0.35
CLPTM1O96005 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.22■□□□□ 0.35
CLPTM1O96005 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.22■□□□□ 0.35
CLPTM1O96005 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CLPTM1O96005 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 PCDHB19P-201ENST00000570871 2371 ntBASIC17.22■□□□□ 0.35
CLPTM1O96005 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPTM1O96005 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CLPTM1O96005 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.22■□□□□ 0.35
CLPTM1O96005 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLPTM1O96005 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLPTM1O96005 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLPTM1O96005 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.21■□□□□ 0.35
CLPTM1O96005 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLPTM1O96005 POU5F1P3-201ENST00000428824 1078 ntBASIC17.21■□□□□ 0.35
CLPTM1O96005 FAM201B-201ENST00000458407 597 ntBASIC17.21■□□□□ 0.35
CLPTM1O96005 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1O96005 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 AP003097.1-201ENST00000530657 1135 ntBASIC17.21■□□□□ 0.35
CLPTM1O96005 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1O96005 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLPTM1O96005 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPTM1O96005 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPTM1O96005 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1O96005 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1O96005 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1O96005 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1O96005 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CLPTM1O96005 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CLPTM1O96005 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLPTM1O96005 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 LINC00602-201ENST00000629776 2065 ntBASIC17.2■□□□□ 0.34
CLPTM1O96005 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLPTM1O96005 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.2■□□□□ 0.34
CLPTM1O96005 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLPTM1O96005 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPTM1O96005 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 AL356309.3-201ENST00000624132 1934 ntBASIC17.2■□□□□ 0.34
CLPTM1O96005 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.2■□□□□ 0.34
CLPTM1O96005 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 AL390719.1-204ENST00000412397 1219 ntBASIC17.2■□□□□ 0.34
CLPTM1O96005 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLPTM1O96005 AC026366.1-201ENST00000488803 879 ntBASIC17.2■□□□□ 0.34
CLPTM1O96005 UNC93B4-201ENST00000505679 747 ntBASIC17.2■□□□□ 0.34
CLPTM1O96005 AC008403.3-201ENST00000598924 454 ntBASIC17.2■□□□□ 0.34
CLPTM1O96005 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLPTM1O96005 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.2■□□□□ 0.34
CLPTM1O96005 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPTM1O96005 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPTM1O96005 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLPTM1O96005 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.2■□□□□ 0.34
CLPTM1O96005 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms